PPDB

The Plant Proteome Database

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AT3G47980.1   Integral membrane HPP family protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62720.1 11Arabidopsis thaliana1E-102254667793 (80)C
AT5G62720.2 11Arabidopsis thaliana6E-69211617378 (73)C
Os03g48030.1 7Oryza sativa2E-7315070820 (0)M
GRMZM2G133684_P01 3.21Zea mays1E-7215367814 (4)C
v1_GRMZM2G133684_P01 4a53Zea mays1E-7215367815 (5)C
Zm00001eb217240_P002 agpv5Zea mays3E-7216563780 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HPP(2)
TargetP: Chloroplast (Class 2 C0.847; M0.105; S0.006; _0.109)
Predotar:
Subcel. Location: Thylakoid membrane
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 252 aa (-cTP 185) (-lTP 139)
Molecular Weight 26.97 kDA(-cTP 19.45)(-lTP 14.69)
PI 10.08(-cTP 9.30)(-lTP 9.785)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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