PPDB

The Plant Proteome Database

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AT3G47960.1   Major facilitator superfamily protein

Lab Annot. proton-dependent oligopeptide transport (POT) protein
Mapman: 34.13 transport.peptides and oligopeptides
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62680.1 11Arabidopsis thaliana061879870 (0)_
AT1G18880.1 11Arabidopsis thaliana057562780 (0)_
AT1G69870.1 11Arabidopsis thaliana7E-17859347641 (1)_
Os03g48180.1 7Oryza sativa0563517115 (15)_
Os12g44110.2 7Oryza sativa056551680 (0)_
Os12g44100.1 7Oryza sativa056648660 (0)_
Zm00001eb053220_P002 agpv5Zea mays059149670 (0)_
Zm00001eb033080_P001 agpv5Zea mays056449680 (0)_
GRMZM2G085411_P02 3.21Zea mays056449680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DHHC(4) MFS_1(2) PTR2(2)
TargetP: Cytoplasm (Class 5 C0.133; M0.435; S0.030; _0.555)
Predotar:
Subcel. Location:
TM-HMM prediction: 12 TMs
Aramemnon: 12 TMs
TAT position:
Length 636 aa (-cTP 607)
Molecular Weight 71.04 kDA(-cTP )
PI 9.11(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
17216043(leaf)
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
22430844(Golgi-cell-culture)
21988472(vacuole (unfiltered data))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help