PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G47930.1   L-galactono-1%2C4-lactone dehydrogenase
Lab Annot. ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE)
Mapman: 21.2.1.5 redox.ascorbate and glutathione.ascorbate.L-Galactono-1,4-lactone dehydrogenase
Curated Location mitochondria (Pubmed: 12837548 )

TAIR curated location: mitochondrion12837548,14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G47930.2 11Arabidopsis thaliana0562999923 (19)M
AT2G19500.1 11Arabidopsis thaliana1E-0731222410 (0)S
AT5G56970.1 11Arabidopsis thaliana8E-0731422422 (2)M
Os12g04520.1 7Oryza sativa055172852 (2)M
Os11g04740.1 7Oryza sativa055172852 (2)M
Os02g03200.1 7Oryza sativa4E-1011931570 (0)C
Zm00001eb093120_P001 agpv5Zea mays054574850 (0)M
GRMZM2G469969_P01 3.21Zea mays054574853 (3)M
Zm00001eb368650_P001 agpv5Zea mays1E-399872840 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ALO(1) DUF3231(1) FAD_binding_4(1) Glyco_hyd_65N_2(2) PRIMA1(1)
TargetP: Mitochondria (Class 2 C0.234; M0.886; S0.005; _0.018)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 610 aa (-cTP 553)
Molecular Weight 68.55 kDA(-cTP )
PI 8.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1613Detail       Natural Senescence leaf [A. thaliana]  
1622Detail        [A. thaliana] m48
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2269Detail       seedlings [A. thaliana] total tissue wild-type
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2313Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 MitoDB(Mitochondrial proteome)
16618929(MITO/PLASTID-LOPIT-callus)
12837548(mitochondria-complex_I)
19546170(mature pollen grains)
20197505(mitochondria Complex I (leaf))
19334764(plasma membrane (cell culture))
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21166475(cytosolic-fractions-crude)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help