PPDB

The Plant Proteome Database

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AT3G47833.1   succinate dehydrogenase subunit

Lab Annot. succinate dehydrogenase 7-1 (SDH7-1)
Mapman: 8.1.7 TCA / org.transformation.TCA.succinate dehydrogenase
Curated Location mitochondria (Pubmed: 28039307 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62575.2 11Arabidopsis thaliana4E-399671810 (0)C
AT5G62575.1 11Arabidopsis thaliana1E-379570810 (0)C
Os09g21470.1 7Oryza sativa5E-228451670 (0)M
Zm00001eb098990_P001 agpv5Zea mays9E-228051670 (0)C
v1_GRMZM2G119950_P01 4a53Zea mays9E-2280516720 (19)C
GRMZM2G119950_P01 3.21Zea mays9E-2280516723 (23)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 3 C0.629; M0.179; S0.019; _0.121)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 93 aa (-cTP 69)
Molecular Weight 10.30 kDA(-cTP 7.75)
PI 10.28(-cTP 10.22)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
1643Detail       leaf [A. thaliana] total leaf tissue Wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help