PPDB

The Plant Proteome Database

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AT3G47720.1   similar to RCD one 4

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62520.1 11Arabidopsis thaliana2E-9731351650 (0)_
AT5G62520.2 11Arabidopsis thaliana1E-6324148620 (0)_
AT1G23550.1 11Arabidopsis thaliana7E-4725635590 (0)_
Os03g12820.1 7Oryza sativa3E-2532625470 (0)_
Os03g12820.2 7Oryza sativa3E-2532625470 (0)_
Os03g63770.1 7Oryza sativa1E-2430026440 (0)_
v1_GRMZM2G022603_P02 4a53Zea mays1E-2420031460 (0)_
v1_GRMZM2G022603_P01 4a53Zea mays2E-2419931460 (0)_
Zm00001eb025040_P002 agpv5Zea mays4E-2421530460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PAS_11(2) RST(1)
TargetP: Cytoplasm (Class 1 C0.094; M0.101; S0.069; _0.938)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 316 aa (-cTP 297)
Molecular Weight 35.42 kDA(-cTP )
PI 7.53(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help