PPDB

The Plant Proteome Database

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AT3G47680.1   DNA binding protein

Lab Annot.
Mapman: 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G41220.3 11Arabidopsis thaliana1E-5533435530 (0)M
AT5G41220.2 11Arabidopsis thaliana2E-5533435530 (0)_
AT5G41220.1 11Arabidopsis thaliana5E-55334355310 (10)_
Os11g14160.1 7Oryza sativa7E-2520835510 (0)_
Os10g31120.1 7Oryza sativa1E-2217135520 (0)_
Os02g54440.1 7Oryza sativa6E-2217833490 (0)C
Zm00001eb199990_P001 agpv5Zea mays5E-2323631500 (0)M
Zm00001eb085790_P001 agpv5Zea mays9E-2325430500 (0)M
AC191748.3_FGP001 3.21Zea mays4E-2219131500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HAND(2) NAM-associated(1)
TargetP: Cytoplasm (Class 2 C0.163; M0.072; S0.121; _0.865)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 302 aa (-cTP 286)
Molecular Weight 34.38 kDA(-cTP )
PI 9.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help