PPDB

PPDB	The Plant Proteome Database

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AT3G47640.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.

Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G47640.3 11 Arabidopsis thaliana 5E-180 240 100 100 0 (0) C
AT3G47640.2 11 Arabidopsis thaliana 5E-180 240 100 100 0 (0) C
AT4G36060.1 11 Arabidopsis thaliana 5E-15 114 36 58 0 (0) C
Os03g26210.2 7 Oryza sativa 8E-38 231 38 55 0 (0) _
Os03g26210.3 7 Oryza sativa 8E-38 231 38 55 0 (0) _
Os03g26210.1 7 Oryza sativa 1E-37 231 38 55 1 (1) _
GRMZM2G350312_P03 3.21 Zea mays 1E-33 126 47 72 0 (0) _
GRMZM2G350312_P02 3.21 Zea mays 1E-33 126 47 72 0 (0) _
Zm00001eb018460_P006 agpv5 Zea mays 1E-33 126 47 72 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	APG6_N(1) Atg14(1) HLH(1) OmpH(1) Peptidase_A3(1) POP1(1) YabA(1) ZapB(1)
TargetP:	Chloroplast (Class 5 C0.743; M0.033; S0.037; _0.655)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	240 aa (-cTP 205)
Molecular Weight	26.94 kDA(-cTP 23.13)
PI	6.10(-cTP 5.40)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data