PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G47560.1 alpha/beta-Hydrolases superfamily protein

Lab Annot.

alpha/beta-Hydrolase (DUF1749) S9 peptidase (E 0.043) - DUF1749 probably esterase
Mapman: 26.57* misc.alpha/beta-Hydrolase family; 29.5.5.5.4* protein.degradation.serine protease.SC.S9

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G47560.4 11 Arabidopsis thaliana 0 265 100 100 0 (0) C
AT3G47560.3 11 Arabidopsis thaliana 0 291 91 91 0 (0) _
AT3G47560.5 11 Arabidopsis thaliana 0 292 90 90 0 (0) _
Os01g39800.1 7 Oryza sativa 7E-103 248 59 76 0 (0) C
Os01g39790.1 7 Oryza sativa 4E-102 250 58 75 2 (2) C
Os05g46210.1 7 Oryza sativa 5E-98 249 56 74 0 (0) _
Zm00001eb160350_P001 agpv5 Zea mays 1E-104 250 56 76 0 (0) _
v1_GRMZM2G130305_P01 4a53 Zea mays 1E-104 250 56 76 38 (38) _
GRMZM2G130305_P01 3.21 Zea mays 1E-104 250 56 76 44 (44) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Abhydrolase_1(2) Abhydrolase_2(3) Abhydrolase_4(1) Abhydrolase_5(2) Abhydrolase_
TargetP:	Cytoplasm (Class 3 C0.212; M0.060; S0.159; _0.707)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	265 aa (-cTP 223)
Molecular Weight	29.87 kDA(-cTP )
PI	5.07(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2182	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2184	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2185	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (M&Skoog))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data