PPDB

 The Plant Proteome Database

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AT3G47550.1   RING/FYVE/PHD zinc finger superfamily protein
Lab Annot. RING/FYVE/PHD zinc finger protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G47550.2 11Arabidopsis thaliana2E-161218991000 (0)_
AT3G47550.3 11Arabidopsis thaliana3E-161218991000 (0)_
AT3G47550.6 11Arabidopsis thaliana3E-161218991000 (0)_
Os08g33860.1 7Oryza sativa2E-6721756650 (0)_
Os08g33860.2 7Oryza sativa2E-6721756650 (0)_
Os09g24650.2 7Oryza sativa3E-6618757680 (0)_
v1_GRMZM2G113619_P02 4a53Zea mays1E-6418957660 (0)_
GRMZM2G113619_P02 3.21Zea mays1E-6418957660 (0)_
v1_GRMZM2G113619_P05 4a53Zea mays9E-6418957660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3675(1) RINGv(1) Tmemb_55A(2) zf-RING_2(2)
TargetP: Cytoplasm (Class 3 C0.301; M0.059; S0.066; _0.839)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 232 aa (-cTP 217)
Molecular Weight 25.78 kDA(-cTP )
PI 4.32(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help