PPDB

PPDB	The Plant Proteome Database

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AT3G47530.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G21065.1 11 Arabidopsis thaliana 1E-156 576 42 61 0 (0) S
AT5G48910.1 11 Arabidopsis thaliana 2E-146 613 38 57 4 (4) C
AT4G21065.2 11 Arabidopsis thaliana 6E-145 466 46 64 0 (0) _
Os08g33700.1 7 Oryza sativa 0 459 60 77 0 (0) C
Os03g60690.1 7 Oryza sativa 1E-148 603 39 59 0 (0) C
Os07g05560.1 7 Oryza sativa 1E-147 591 41 60 0 (0) M
v1_GRMZM2G161368_P01 4a53 Zea mays 0 575 53 70 0 (0) C
GRMZM2G161368_P01 3.21 Zea mays 0 575 53 70 0 (0) C
Zm00001eb041380_P001 agpv5 Zea mays 0 575 53 70 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(2) PHD_like(1) PPR(10) PPR_1(6) PPR_2(8) PPR_3(8) PPR_long(3)
TargetP:	Cytoplasm (Class 4 C0.211; M0.023; S0.027; _0.556)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	591 aa (-cTP 572)
Molecular Weight	66.32 kDA(-cTP )
PI	8.16(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19106119(plasma membrane detergent resistent microdomains (DRM))

Comparative Proteomics Data