PPDB

PPDB	The Plant Proteome Database

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AT3G47480.1 Calcium-binding EF-hand family protein

Lab Annot.

Mapman: 30.3 signalling.calcium

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G39670.1 11 Arabidopsis thaliana 1E-16 69 50 78 0 (0) _
AT3G29000.1 11 Arabidopsis thaliana 1E-15 69 53 75 0 (0) S
AT4G20780.1 11 Arabidopsis thaliana 6E-11 63 47 66 0 (0) _
Os09g24580.1 7 Oryza sativa 1E-15 66 45 65 0 (0) C
Os04g41540.1 7 Oryza sativa 5E-12 66 42 68 0 (0) M
Os07g12240.1 7 Oryza sativa 1E-11 66 42 69 0 (0) S
Zm00001eb099610_P001 agpv5 Zea mays 6E-17 68 48 72 0 (0) C
v1_GRMZM2G088819_P01 4a53 Zea mays 6E-17 68 48 72 0 (0) C
GRMZM2G088819_P01 3.21 Zea mays 6E-17 68 48 72 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Dockerin_1(2) EF-hand_1(2) EF-hand_5(2) EF-hand_6(2) EF-hand_7(1) EF-hand_8(2) M
TargetP:	Secreted (Class 1 C0.007; M0.017; S0.956; _0.080)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	183 aa (-cTP 104)
Molecular Weight	21.46 kDA(-cTP )
PI	4.64(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data