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PPDB	The Plant Proteome Database

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AT3G47460.1 Structural maintenance of chromosomes (SMC) family protein

Lab Annot.

Structural maintenance of chromosomes (SMC) protein
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G47460.2 11 Arabidopsis thaliana 0 1174 99 99 0 (0) _
AT5G62410.1 11 Arabidopsis thaliana 0 1174 83 92 1 (0) _
AT2G27170.1 11 Arabidopsis thaliana 4E-62 1289 24 44 19 (6) _
Os01g67740.1 7 Oryza sativa 0 1170 69 84 2 (2) _
Os02g04050.1 7 Oryza sativa 2E-39 718 25 47 0 (0) _
Os12g44390.1 7 Oryza sativa 8E-23 608 24 46 2 (2) _
Zm00001eb144310_P001 agpv5 Zea mays 0 1170 68 83 0 (0) _
Zm00001eb144310_P002 agpv5 Zea mays 0 1065 66 82 0 (0) _
GRMZM2G006452_P01 3.21 Zea mays 0 539 68 83 3 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_21(2) AAA_23(1) AAA_29(1) ABC_tran(3) Baculo_PEP_C(5) BST2(5) CC2-LZ(7) CENP
TargetP:	Cytoplasm (Class 2 C0.079; M0.032; S0.130; _0.853)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1171 aa (-cTP 1113)
Molecular Weight	132.31 kDA(-cTP )
PI	6.59(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1470	Detail								leaf [A. thaliana]	co-IP GST stroma	clpc1 x clps (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))

Comparative Proteomics Data