PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G47440.1   tonoplast intrinsic protein 5%3B1

Lab Annot.
Mapman: 34.19.2 transport.Major Intrinsic Proteins.TIP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G16240.1 11Arabidopsis thaliana6E-6322846631110 (1037)S
AT5G47450.1 11Arabidopsis thaliana7E-6322546661 (1)S
AT4G17340.1 11Arabidopsis thaliana1E-592254866119 (117)S
Os04g46490.1 7Oryza sativa2E-6724350640 (0)S
Os02g44080.1 7Oryza sativa1E-6123747660 (0)S
Os06g22960.1 7Oryza sativa4E-562284364257 (257)_
Zm00001eb429760_P001 agpv5Zea mays4E-6724150640 (0)M
v1_GRMZM2G056908_P01 4a53Zea mays5E-65225476610 (10)S
GRMZM2G056908_P01 3.21Zea mays5E-6522547663 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MIP(1)
TargetP: Mitochondria (Class 5 C0.005; M0.282; S0.225; _0.110)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 6 TMs
TAT position:
Length 256 aa (-cTP 219)
Molecular Weight 26.64 kDA(-cTP )
PI 8.46(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help