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AT3G47390.1
cytidine/deoxycytidylate deaminase family protein
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| Lab Annot. |
PHS1 - deaminase riboflavin pathway
Mapman: 18.3 Co-factor and vitamine metabolism.riboflavin |
| Curated Location |
plastid stroma (Pubmed: 23198870 )
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
dCMP_cyt_deam_1(1) NADAR(1) RibD_C(2) |
| TargetP: |
Chloroplast (Class 5 C0.370; M0.354; S0.123; _0.044) |
| Predotar: |
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| Subcel. Location: |
Lumen |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
599 aa (-cTP 583) (-lTP 514) |
| Molecular Weight |
65.50 kDA(-cTP 63.75)(-lTP 56.66) |
| PI |
7.30(-cTP 6.89)(-lTP 7.059) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 542 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) >500 kDa (HMB) | wild-type |
| 1208 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpp3 null |
| 1485 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 3) |
| 1943 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1944 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | UVR |
| 1948 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 2112 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wt |
| 2313 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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21515685(GreenCut2)
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Comparative Proteomics Data
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