PPDB

PPDB	The Plant Proteome Database

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AT3G47160.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G47160.2 11 Arabidopsis thaliana 0 257 95 95 0 (0) _
AT3G47160.3 11 Arabidopsis thaliana 3E-157 208 100 100 0 (0) S
AT5G58787.1 11 Arabidopsis thaliana 2E-143 245 80 90 0 (0) _
Os07g46700.3 7 Oryza sativa 1E-118 241 64 80 0 (0) _
Os10g35670.1 7 Oryza sativa 3E-118 241 67 82 0 (0) _
Os07g46700.2 7 Oryza sativa 6E-113 223 65 82 0 (0) _
Zm00001eb433880_P001 agpv5 Zea mays 2E-126 242 69 81 0 (0) _
GRMZM2G440259_P02 3.21 Zea mays 2E-126 242 69 81 0 (0) _
Zm00001eb433880_P002 agpv5 Zea mays 4E-125 240 69 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBR(1) Peptidase_S76(1) Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) z
TargetP:	Cytoplasm (Class 2 C0.118; M0.073; S0.189; _0.791)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	245 aa (-cTP 170)
Molecular Weight	28.52 kDA(-cTP )
PI	6.94(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data