PPDB

PPDB	The Plant Proteome Database

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AT3G47120.1 RNA recognition motif (RRM)-containing protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G47120.2 11 Arabidopsis thaliana 0 352 85 85 0 (0) _
AT5G61030.1 11 Arabidopsis thaliana 4E-10 112 32 58 3 (2) M
AT5G61030.2 11 Arabidopsis thaliana 4E-10 112 32 58 0 (0) M
Os03g61110.1 7 Oryza sativa 2E-88 181 72 86 0 (0) _
Os07g43050.2 7 Oryza sativa 8E-11 75 42 60 0 (0) M
Os07g43050.3 7 Oryza sativa 8E-11 75 42 60 0 (0) M
GRMZM2G123876_P01 3.21 Zea mays 8E-105 215 72 84 0 (0) _
v1_GRMZM2G123876_P01 4a53 Zea mays 8E-105 215 72 84 1 (1) _
Zm00001eb063190_P002 agpv5 Zea mays 8E-105 215 72 84 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	RRM_1(1) RRM_5(1) RRM_7(1) Torus(2) zf-CCCH(2) zf-CCCH_2(2) zf-CCCH_3(2) zf-CCCH
TargetP:	Cytoplasm (Class 2 C0.029; M0.282; S0.061; _0.884)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	352 aa (-cTP 329)
Molecular Weight	40.68 kDA(-cTP )
PI	8.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data