PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G47080.1   Tetratricopeptide repeat (TPR)-like superfamily protein
Lab Annot. Tetratricopeptide repeat (TPR) protein
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07280.2 11Arabidopsis thaliana6E-14057644582 (2)C
AT1G07280.3 11Arabidopsis thaliana6E-14057644582 (2)C
AT1G07280.1 11Arabidopsis thaliana6E-14057644582 (2)C
Os01g63620.1 7Oryza sativa5E-8341939540 (0)C
Os05g37520.1 7Oryza sativa1E-8138441590 (0)C
Os05g37520.2 7Oryza sativa2E-7437540580 (0)C
v1_GRMZM2G177518_P01 4a53Zea mays5E-6945136510 (0)C
GRMZM2G177518_P01 3.21Zea mays5E-6945136510 (0)C
Zm00001eb147530_P001 agpv5Zea mays5E-6945136510 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: TPR_1(2) TPR_17(3) TPR_2(2) TPR_8(2)
TargetP: Chloroplast (Class 3 C0.695; M0.078; S0.002; _0.234)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 515 aa (-cTP 483)
Molecular Weight 58.19 kDA(-cTP 54.67)
PI 6.16(-cTP 5.96)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help