PPDB

PPDB	The Plant Proteome Database

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AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G46870.2 11 Arabidopsis thaliana 0 269 95 95 0 (0) C
AT1G62350.2 11 Arabidopsis thaliana 2E-60 192 47 70 0 (0) M
AT1G62350.1 11 Arabidopsis thaliana 4E-57 181 47 71 0 (0) _
Os07g36450.1 7 Oryza sativa 7E-112 199 76 87 0 (0) M
Os03g18620.1 7 Oryza sativa 2E-56 193 45 68 0 (0) M
Os04g39970.1 7 Oryza sativa 2E-14 120 33 55 0 (0) M
Zm00001eb106590_P001 agpv5 Zea mays 3E-112 211 73 84 0 (0) M
GRMZM2G063263_P01 3.21 Zea mays 3E-112 211 73 84 0 (0) M
v1_GRMZM2G063263_P01 4a53 Zea mays 3E-112 211 73 84 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3683(1) PPR(2) PPR_1(2) PPR_2(3) PPR_3(2) PPR_long(1) TetR_C_4(1)
TargetP:	Chloroplast (Class 3 C0.702; M0.301; S0.025; _0.013)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	257 aa (-cTP 202)
Molecular Weight	30.13 kDA(-cTP 23.82)
PI	9.27(-cTP 7.10)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
19334764(plasma membrane (cell culture))
20018591(Zn2+ binding (mitochondria - cell culture))
19995723(chloroplast reference proteome)

Comparative Proteomics Data