PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G46640.1   Homeodomain-like superfamily protein

Lab Annot. Homeodomain-like protein
Mapman: 27.3.20 RNA.regulation of transcription.G2-like transcription factor family, GARP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46640.2 11Arabidopsis thaliana03231001000 (0)_
AT3G46640.3 11Arabidopsis thaliana0294991000 (0)_
AT5G59570.1 11Arabidopsis thaliana7E-11633161690 (0)_
Os01g74020.1 7Oryza sativa2E-6223050600 (0)_
Os05g34110.1 7Oryza sativa2E-356889940 (0)_
Os01g62660.1 7Oryza sativa2E-256175880 (0)C
Zm00001eb139830_P001 agpv5Zea mays6E-6323350630 (0)_
GRMZM2G067702_P01 3.21Zea mays5E-6122850610 (0)_
Zm00001eb362240_P001 agpv5Zea mays5E-6122850610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Macoilin(1) Myb_DNA-binding(1)
TargetP: Cytoplasm (Class 2 C0.209; M0.038; S0.008; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 323 aa (-cTP 254)
Molecular Weight 34.65 kDA(-cTP )
PI 5.47(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help