PPDB

PPDB	The Plant Proteome Database

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AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein

Lab Annot.

zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G59550.2 11 Arabidopsis thaliana 1E-163 382 69 80 0 (0) _
AT5G59550.1 11 Arabidopsis thaliana 2E-163 383 69 79 0 (0) _
AT2G39720.2 11 Arabidopsis thaliana 4E-85 334 44 60 0 (0) _
Os05g01940.1 7 Oryza sativa 2E-90 308 49 62 0 (0) C
Os03g16480.1 7 Oryza sativa 7E-74 327 44 55 0 (0) M
Os01g74040.1 7 Oryza sativa 4E-53 298 38 50 0 (0) _
v1_GRMZM2G567897_P01 4a53 Zea mays 3E-91 376 43 56 0 (0) C
Zm00001eb266970_P001 agpv5 Zea mays 3E-91 376 43 56 0 (0) C
GRMZM2G567897_P01 3.21 Zea mays 3E-91 376 43 56 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1117(1) Elf1(2) Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(2) zf-C3HC4_2(1) zf-C3H
TargetP:	Cytoplasm (Class 3 C0.228; M0.070; S0.033; _0.812)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	395 aa (-cTP 357)
Molecular Weight	43.15 kDA(-cTP )
PI	6.07(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19245862(nuclear phosphoproteins (seedlings & cell culture))

Comparative Proteomics Data