PPDB

PPDB	The Plant Proteome Database

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AT3G46610.1 Pentatricopeptide repeat (PPR-like) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G46610.2 11 Arabidopsis thaliana 0 665 100 100 0 (0) _
AT5G14350.1 11 Arabidopsis thaliana 3E-53 140 66 76 2 (2) _
AT1G09900.1 11 Arabidopsis thaliana 3E-38 491 24 45 2 (2) _
Os12g18640.1 7 Oryza sativa 0 562 57 73 0 (0) C
Os02g35750.1 7 Oryza sativa 4E-35 456 24 42 0 (0) C
Os02g35750.2 7 Oryza sativa 4E-35 456 24 42 0 (0) C
GRMZM2G056116_P01 3.21 Zea mays 0 541 56 72 31 (31) C
GRMZM2G056116_P02 3.21 Zea mays 0 541 56 72 31 (31) C
Zm00001eb273000_P002 agpv5 Zea mays 0 541 56 72 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BKACE(3) PPR(12) PPR_1(11) PPR_2(10) PPR_3(7) PPR_long(3) UME(1)
TargetP:	Cytoplasm (Class 5 C0.225; M0.026; S0.035; _0.225)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	665 aa (-cTP 597)
Molecular Weight	75.17 kDA(-cTP )
PI	7.08(-cTP )

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data