PPDB

 The Plant Proteome Database

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AT3G46590.1   TRF-like 1
Lab Annot. TRF-like 1
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46590.2 11Arabidopsis thaliana055399990 (0)_
AT3G46590.3 11Arabidopsis thaliana055398980 (0)_
AT3G46590.5 11Arabidopsis thaliana05121001000 (0)S
Os03g16700.1 7Oryza sativa8E-9641347580 (0)_
Os03g16700.3 7Oryza sativa8E-9641347580 (0)_
Os03g16700.2 7Oryza sativa8E-9641347580 (0)_
Zm00001eb012310_P004 agpv5Zea mays2E-9641447590 (0)C
Zm00001eb012310_P001 agpv5Zea mays2E-9641447590 (0)C
Zm00001eb012310_P005 agpv5Zea mays2E-9641447590 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Myb_DNA-binding(1) Ubiquitin_4(2)
TargetP: Cytoplasm (Class 2 C0.145; M0.080; S0.075; _0.760)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 552 aa (-cTP 484)
Molecular Weight 61.65 kDA(-cTP )
PI 9.16(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 17660356(tonoplast (Brassica oleracea buds))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help