PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G46550.1 Fasciclin-like arabinogalactan family protein

Lab Annot.

SOS5 (SALT OVERLY SENSITIVE 5)
Mapman: 10.5.1 cell wall.cell wall proteins.AGPs

Curated Location

plasma membrane

TAIR curated location: external side of plasma membrane & anchored to membrane12068095,12509519,12805588

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G45470.1 11 Arabidopsis thaliana 8E-36 356 33 51 680 (502) S
AT3G60900.1 11 Arabidopsis thaliana 1E-33 359 34 51 16 (15) S
AT5G55730.1 11 Arabidopsis thaliana 1E-28 337 31 51 300 (205) S
Os01g62380.2 7 Oryza sativa 9E-116 411 49 64 0 (0) M
Os01g62380.1 7 Oryza sativa 6E-115 408 50 65 0 (0) M
Os05g38500.1 7 Oryza sativa 6E-114 345 55 70 0 (0) S
v1_GRMZM2G421415_P01 4a53 Zea mays 2E-118 415 50 64 0 (0) S
GRMZM2G421415_P01 3.21 Zea mays 2E-118 415 50 64 0 (0) S
Zm00001eb367960_P002 agpv5 Zea mays 7E-118 407 50 66 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Fasciclin(2)
TargetP:	Secreted (Class 2 C0.071; M0.003; S0.712; _0.011)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	2 TMs
TAT position:
Length	420 aa (-cTP 366)
Molecular Weight	44.24 kDA(-cTP )
PI	5.57(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14517339(GPI anchored suspension cells)
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data