PPDB

 The Plant Proteome Database

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AT3G46520.1   actin-12
Lab Annot. actin 12 (ACT12)
Mapman: 31.1 cell.organisation
Curated Location
TAIR curated location: mitochondrion & cytoskeleton14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46520.2 11Arabidopsis thaliana03771001000 (0)_
AT5G59370.1 11Arabidopsis thaliana037799100140 (37)_
AT5G59370.2 11Arabidopsis thaliana037799100140 (37)_
Os03g50885.1 7Oryza sativa0377969822 (22)_
Os03g61970.1 7Oryza sativa0377969819 (19)_
Os11g06390.4 7Oryza sativa0377959743 (43)_
GRMZM2G047055_P03 3.21Zea mays03779698316 (226)_
GRMZM2G047055_P01 3.21Zea mays03779698316 (226)_
Zm00001eb216070_P001 agpv5Zea mays037796980 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Actin(1)
TargetP: Cytoplasm (Class 2 C0.153; M0.112; S0.092; _0.895)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 377 aa (-cTP 331)
Molecular Weight 41.79 kDA(-cTP )
PI 5.37(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1018Detail        [aphid]  
1122Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1180Detail       leaf [A. thaliana] co-IP OEC23 stromaclpr2-1
1264Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 3) thylakoid membranewild-type
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1514Detail       leaf [A. thaliana] wild-type
1546Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3
1549Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1551Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1566Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1567Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1568Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2216Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2253Detail       seedlings [A. thaliana] total tissue atg5
2254Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2269Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 MitoDB(Mitochondrial proteome)
16242667(mature Pollen)
11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
18814325(cotyledons)
19546170(mature pollen grains)
18796151(cell wall (hypocotyl))
20061580(chloroplast envelope (inner+outer))
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data

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