PPDB

The Plant Proteome Database

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AT3G46490.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46490.2 11Arabidopsis thaliana028498990 (0)_
AT3G46500.5 11Arabidopsis thaliana032774830 (0)_
AT1G35190.1 11Arabidopsis thaliana1E-17832774840 (0)_
Os01g09300.3 7Oryza sativa1E-15131761800 (0)_
Os01g09300.2 7Oryza sativa4E-15032259780 (0)_
Os01g09300.1 7Oryza sativa3E-14534955720 (0)_
Zm00001eb337550_P005 agpv5Zea mays6E-15632063790 (0)_
GRMZM2G147882_P04 3.21Zea mays6E-15632063790 (0)_
v1_GRMZM2G147882_P04 4a53Zea mays6E-15632063791 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(2) DIOX_N(1)
TargetP: Cytoplasm (Class 2 C0.032; M0.091; S0.295; _0.913)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 330 aa (-cTP 317)
Molecular Weight 37.61 kDA(-cTP )
PI 5.76(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help