PPDB

 The Plant Proteome Database

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AT3G46450.1   SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Lab Annot. SEC14 cytosolic factor
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46450.3 11Arabidopsis thaliana04861001000 (0)_
AT3G46450.2 11Arabidopsis thaliana0494989810 (10)_
AT2G21540.6 11Arabidopsis thaliana5E-0923624420 (0)_
Os03g60610.1 7Oryza sativa1E-14445745640 (0)C
Os03g60610.3 7Oryza sativa1E-14445745640 (0)C
Os03g60610.2 7Oryza sativa1E-14445745640 (0)C
Zm00001eb062630_P003 agpv5Zea mays2E-15046844640 (0)_
Zm00001eb062630_P002 agpv5Zea mays2E-15046844640 (0)_
Zm00001eb062630_P001 agpv5Zea mays2E-15046844640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CRAL_TRIO(1) CRAL_TRIO_2(2) DUF4685(1)
TargetP: Cytoplasm (Class 5 C0.276; M0.251; S0.002; _0.433)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 486 aa (-cTP 457)
Molecular Weight 55.39 kDA(-cTP )
PI 8.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1465Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 1)
1467Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 2)
1469Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 3)
1470Detail       leaf [A. thaliana] co-IP GST stroma clpc1 x clps (rep. 3)
1471Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clps (rep. 1-2)
1472Detail       leaf [A. thaliana] co-IP GST stroma clps (rep. 1-2)
1476Detail       leaf [A. thaliana] co-IP GST-ClpSmut stroma clpc1 x clps (rep. 4)
1478Detail       leaf [A. thaliana] co-IP GST-ClpSmut stroma clpc1 x clps (rep. 5)
2181Detail       leaf [A. thaliana] stroma Clp ClpF x ClpS1

* For details about the exprimental sources click here.

Published Proteomics Data

 18463617(suspension cells-phosphorylated proteins)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help