PPDB

The Plant Proteome Database

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AT3G46230.1   heat shock protein 17.4

Lab Annot. small heat shock protein sHSP 17.4 - Class CI
Mapman: 20.2.1 stress.abiotic.heat
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G53540.1 11Arabidopsis thaliana6E-9915789943 (3)_
AT5G59720.1 11Arabidopsis thaliana1E-8215980892 (2)_
AT1G07400.1 11Arabidopsis thaliana2E-7116066842 (2)_
Os03g16040.1 7Oryza sativa9E-7116566750 (0)_
Os03g15960.1 7Oryza sativa2E-7016765770 (0)_
Os03g16030.1 7Oryza sativa3E-6616765770 (0)_
Zm00001eb011930_P001 agpv5Zea mays2E-7116665780 (0)_
v1_GRMZM2G306679_P01 4a53Zea mays2E-7116665781 (1)_
GRMZM2G306679_P01 3.21Zea mays2E-7116665780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArsA_HSP20(1) CS(1) DUF3221(1) DUF4488(1) FKBP26_C(2) HSP20(1)
TargetP: Cytoplasm (Class 4 C0.044; M0.358; S0.057; _0.720)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 156 aa (-cTP 151)
Molecular Weight 17.44 kDA(-cTP )
PI 5.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
94Detail       root [B. rapa] plastid stroma 
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
2252Detail       seedlings [A. thaliana] total tissue gfs9
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
18436743(specific to seeds)
20702726(mature seeds)
20813957(SUMO proteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help