PPDB

The Plant Proteome Database

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AT3G46220.1   E3 UFM1-protein ligase-like protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46220.2 11Arabidopsis thaliana081299993 (1)_
AT3G46220.3 11Arabidopsis thaliana080498983 (1)_
AT3G46220.4 11Arabidopsis thaliana077099990 (0)_
Os05g02650.1 7Oryza sativa083056732 (2)_
Zm00001eb266020_P001 agpv5Zea mays081856740 (0)_
Zm00001eb266020_P002 agpv5Zea mays065155730 (0)_
v1_GRMZM2G094581_P01 4a53Zea mays5E-12525170850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1657(1) E3_UFM1_ligase(1) SAC3(1) TraC(2)
TargetP: Cytoplasm (Class 2 C0.113; M0.167; S0.076; _0.787)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 804 aa (-cTP 781)
Molecular Weight 89.07 kDA(-cTP )
PI 5.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2146Detail       Total leaf [A. thaliana] total soluble stromawt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help