PPDB

The Plant Proteome Database

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AT3G46110.1   UPSTREAM OF FLC-like protein (DUF966)

Lab Annot. unknown protein (DUF966)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46110.2 11Arabidopsis thaliana03111001003 (3)M
AT3G46110.3 11Arabidopsis thaliana02791001000 (0)_
AT5G59790.1 11Arabidopsis thaliana2E-13539958680 (0)_
Os01g62200.2 7Oryza sativa2E-6232940560 (0)_
Os01g62200.1 7Oryza sativa1E-6132839550 (0)_
Os03g09200.1 7Oryza sativa2E-4436734490 (0)_
GRMZM5G871592_P01 3.21Zea mays3E-6237337530 (0)M
Zm00001eb368040_P001 agpv5Zea mays8E-5936138550 (0)M
GRMZM2G112836_P01 3.21Zea mays2E-5833038560 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CheW(1) DUF966(2)
TargetP: Mitochondria (Class 5 C0.297; M0.428; S0.056; _0.249)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 343 aa (-cTP 336)
Molecular Weight 38.93 kDA(-cTP )
PI 8.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help