PPDB

PPDB	The Plant Proteome Database

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AT3G46090.1 C2H2 and C2HC zinc fingers superfamily protein

Lab Annot.

Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G46080.1 11 Arabidopsis thaliana 6E-97 169 87 91 0 (0) _
AT3G46070.1 11 Arabidopsis thaliana 1E-64 173 63 72 0 (0) _
AT5G59820.1 11 Arabidopsis thaliana 3E-61 167 64 72 0 (0) _
Os01g62190.1 7 Oryza sativa 4E-21 85 51 64 0 (0) C
Os03g17150.1 7 Oryza sativa 1E-20 73 57 69 0 (0) _
Os05g02390.1 7 Oryza sativa 1E-19 74 62 70 0 (0) _
Zm00001eb012700_P001 agpv5 Zea mays 6E-24 170 39 52 0 (0) _
GRMZM2G048154_P01 3.21 Zea mays 6E-24 170 39 52 0 (0) _
v1_GRMZM2G048154_P01 4a53 Zea mays 6E-24 170 39 52 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FYVE(2) OrfB_Zn_ribbon(2) zf-C2H2(2) zf-C2H2_11(2) zf-C2H2_2(2) zf-C2H2_3rep(2)
TargetP:	Cytoplasm (Class 1 C0.078; M0.053; S0.018; _0.888)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	168 aa (-cTP 71)
Molecular Weight	18.36 kDA(-cTP )
PI	9.22(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data