PPDB

The Plant Proteome Database

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AT3G46020.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59860.1 11Arabidopsis thaliana6E-368670810 (0)_
AT3G23830.1 11Arabidopsis thaliana2E-208148691 (1)M
AT3G23830.2 11Arabidopsis thaliana2E-208148691 (1)M
Os01g31810.2 7Oryza sativa7E-348360840 (0)M
Os04g33810.1 7Oryza sativa1E-218046730 (0)M
Os04g49440.3 7Oryza sativa4E-207944740 (0)C
GRMZM2G577405_P01 3.21Zea mays2E-308356790 (0)M
Zm00001eb428060_P001 agpv5Zea mays5E-208345680 (0)C
v1_GRMZM2G113513_P01 4a53Zea mays1E-198045710 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nup35_RRM(1) PHM7_cyt(1) RRM_1(1)
TargetP: Mitochondria (Class 2 C0.069; M0.776; S0.084; _0.032)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 102 aa (-cTP 96)
Molecular Weight 11.42 kDA(-cTP )
PI 9.45(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help