PPDB

 The Plant Proteome Database

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AT3G46010.1   actin depolymerizing factor 1
Lab Annot. actin-depolymerizing factor 1 (ADF1)
Mapman: 31.1 cell.organisation
Curated Location cytoskeleton (Pubmed: 11414611 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46010.2 11Arabidopsis thaliana5E-10113810010021 (14)S
AT5G59890.1 11Arabidopsis thaliana5E-96139939727 (14)_
AT5G59890.3 11Arabidopsis thaliana4E-9013293960 (0)_
Os02g44470.1 7Oryza sativa7E-7713774917 (7)_
Os04g46910.1 7Oryza sativa8E-7513871890 (0)_
Os05g02250.2 6Oryza sativa9E-75139809216 (16)_
GRMZM2G037140_P01 3.21Zea mays5E-7813976895 (2)_
v1_GRMZM2G037140_P01 4a53Zea mays5E-7813976891 (1)_
v1_GRMZM2G463471_P01 4a53Zea mays1E-7313871884 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cofilin_ADF(1)
TargetP: Cytoplasm (Class 3 C0.093; M0.202; S0.159; _0.724)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 139 aa (-cTP 136)
Molecular Weight 16.11 kDA(-cTP )
PI 6.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2296Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help