PPDB

The Plant Proteome Database

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AT3G45970.1   expansin-like A1

Lab Annot.
Mapman: 10.7 cell wall.modification
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta)16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G45970.2 11Arabidopsis thaliana5E-17022798990 (0)S
AT3G45960.2 11Arabidopsis thaliana3E-15726585920 (0)S
AT4G38400.1 11Arabidopsis thaliana1E-14924687931 (1)S
Os10g39640.1 7Oryza sativa3E-10026654720 (0)S
Os03g04020.1 7Oryza sativa1E-9924954730 (0)M
Os03g04020.2 7Oryza sativa1E-8922854720 (0)_
GRMZM2G095968_P01 3.21Zea mays2E-9925255720 (0)S
v1_GRMZM2G095968_P01 4a53Zea mays2E-9925255720 (0)S
GRMZM2G095968_P02 3.21Zea mays3E-9725655710 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DPBB_1(2) DUF4840(2) Expansin_C(1)
TargetP: Secreted (Class 2 C0.040; M0.104; S0.854; _0.011)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 265 aa (-cTP 230)
Molecular Weight 28.70 kDA(-cTP )
PI 8.28(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

14595688(Cell Wall proteome)
18998720(SA-induced secreted proteome (cell culture))
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
18796151(cell wall (hypocotyl))
20706207(cell cycle interactome (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
22430844(Golgi-cell-culture)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help