PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G45960.2 expansin-like A3

Lab Annot.

Mapman: 10.7 cell wall.modification

Curated Location

TAIR curated location: cell wall (sensu Magnoliophyta)16287169

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G45960.1 11 Arabidopsis thaliana 4E-162 215 100 100 0 (0) C
AT3G45970.1 11 Arabidopsis thaliana 2E-157 265 85 92 1 (1) S
AT3G45970.2 11 Arabidopsis thaliana 5E-143 227 83 91 0 (0) S
Os10g39640.1 7 Oryza sativa 6E-95 259 53 72 0 (0) S
Os03g04020.1 7 Oryza sativa 3E-93 248 54 70 0 (0) M
Os03g04020.2 7 Oryza sativa 6E-84 227 54 69 0 (0) _
GRMZM2G095968_P01 3.21 Zea mays 4E-94 251 55 70 0 (0) S
v1_GRMZM2G095968_P01 4a53 Zea mays 4E-94 251 55 70 0 (0) S
GRMZM2G095968_P02 3.21 Zea mays 1E-91 255 54 69 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DPBB_1(2) Expansin_C(1)
TargetP:	Secreted (Class 3 C0.027; M0.213; S0.744; _0.010)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	263 aa (-cTP 228)
Molecular Weight	28.56 kDA(-cTP )
PI	9.20(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
18796151(cell wall (hypocotyl))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data