PPDB

PPDB	The Plant Proteome Database

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AT3G45900.1 Ribonuclease P protein subunit P38-like protein

Lab Annot.

Ribonuclease P protein subunit P38-related
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53020.1 11 Arabidopsis thaliana 1E-19 249 32 50 0 (0) _
AT5G53020.4 11 Arabidopsis thaliana 1E-19 249 32 50 0 (0) _
AT5G53020.5 11 Arabidopsis thaliana 1E-19 249 32 50 0 (0) _
Os03g63660.1 7 Oryza sativa 1E-86 199 63 82 0 (0) C
Os01g36970.1 7 Oryza sativa 1E-14 152 35 48 0 (0) _
GRMZM2G099987_P02 3.21 Zea mays 2E-79 199 65 82 0 (0) C
GRMZM2G099987_P03 3.21 Zea mays 2E-79 199 65 82 0 (0) C
Zm00001eb064790_P002 agpv5 Zea mays 2E-79 199 65 82 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BLOC1_2(2) Cep57_MT_bd(2) DUF2203(3) DUF2852(1) DUF4407(2) Exonuc_VII_L(2) FapA(
TargetP:	Cytoplasm (Class 1 C0.064; M0.064; S0.018; _0.979)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	389 aa (-cTP 314)
Molecular Weight	45.34 kDA(-cTP )
PI	5.39(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2040	Detail								Total leaf [A. thaliana]	chloroplast stroma	wt and icp55c-3

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))

Comparative Proteomics Data