PPDB

The Plant Proteome Database

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AT3G45900.1   Ribonuclease P protein subunit P38-like protein

Lab Annot. Ribonuclease P protein subunit P38-related
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G53020.1 11Arabidopsis thaliana1E-1924932500 (0)_
AT5G53020.4 11Arabidopsis thaliana1E-1924932500 (0)_
AT5G53020.5 11Arabidopsis thaliana1E-1924932500 (0)_
Os03g63660.1 7Oryza sativa1E-8619963820 (0)C
Os01g36970.1 7Oryza sativa1E-1415235480 (0)_
GRMZM2G099987_P02 3.21Zea mays2E-7919965820 (0)C
GRMZM2G099987_P03 3.21Zea mays2E-7919965820 (0)C
Zm00001eb064790_P002 agpv5Zea mays2E-7919965820 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BLOC1_2(2) Cep57_MT_bd(2) DUF2203(3) DUF2852(1) DUF4407(2) Exonuc_VII_L(2) FapA(
TargetP: Cytoplasm (Class 1 C0.064; M0.064; S0.018; _0.979)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 389 aa (-cTP 314)
Molecular Weight 45.34 kDA(-cTP )
PI 5.39(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2040Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help