PPDB

PPDB	The Plant Proteome Database

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AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

RNA binding (RRM/RBD/RNP motifs) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G45630.2 11 Arabidopsis thaliana 0 989 100 100 0 (0) _
AT5G60170.1 11 Arabidopsis thaliana 0 1012 65 76 1 (1) _
AT5G60170.2 11 Arabidopsis thaliana 0 1014 65 76 0 (0) _
Os12g01190.3 6 Oryza sativa 5E-133 337 60 76 0 (0) _
Os12g01190.1 6 Oryza sativa 4E-131 337 60 76 0 (0) _
Os12g01190.2 7 Oryza sativa 5E-131 337 60 76 0 (0) _
v1_GRMZM2G400238_P01 4a53 Zea mays 1E-124 401 53 69 0 (0) _
GRMZM2G400238_P01 3.21 Zea mays 1E-124 401 53 69 0 (0) _
v1_GRMZM2G400238_P02 4a53 Zea mays 3E-122 401 53 69 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_IE-1(1) PcfJ(1) Rad50_zn_hook(2) RRM_1(1) Rtf2(1) zf-C3HC4_3(1) zf-RING_2
TargetP:	Cytoplasm (Class 1 C0.086; M0.091; S0.110; _0.939)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	989 aa (-cTP 978)
Molecular Weight	108.44 kDA(-cTP )
PI	5.85(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data