PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G45590.1   splicing endonuclease 1

Lab Annot.
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G45590.2 11Arabidopsis thaliana2E-1762371001000 (0)_
AT5G60230.2 11Arabidopsis thaliana3E-12923574860 (0)C
AT5G60230.1 11Arabidopsis thaliana4E-12923574860 (0)_
Os11g38930.1 7Oryza sativa4E-6424845610 (0)_
Os06g33980.2 7Oryza sativa2E-6024345610 (0)_
Os06g33980.1 7Oryza sativa2E-6024345610 (0)_
Zm00001eb228610_P002 agpv5Zea mays1E-5924643620 (0)_
v1_GRMZM2G036991_P02 4a53Zea mays1E-5924643620 (0)_
GRMZM2G036991_P01 3.21Zea mays1E-5924643620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: tRNA_int_endo(1) tRNA_int_endo_N(1)
TargetP: Cytoplasm (Class 5 C0.097; M0.319; S0.080; _0.385)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 237 aa (-cTP 218)
Molecular Weight 27.36 kDA(-cTP )
PI 8.42(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help