PPDB

PPDB	The Plant Proteome Database

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AT3G45570.1 RING/U-box protein with C6HC-type zinc finger domain-containing protein

Lab Annot.

RING/U-box protein with C6HC-type zinc finger domain
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G45580.1 11 Arabidopsis thaliana 0 313 82 90 0 (0) _
AT3G43750.1 11 Arabidopsis thaliana 1E-144 306 67 80 0 (0) S
AT2G26130.1 11 Arabidopsis thaliana 1E-108 310 56 70 0 (0) _
Os12g43560.1 7 Oryza sativa 2E-24 302 27 48 0 (0) _
Os11g01240.1 7 Oryza sativa 7E-16 223 25 47 0 (0) S
Os09g25220.1 7 Oryza sativa 2E-15 146 27 47 0 (0) _
Zm00001eb194870_P001 agpv5 Zea mays 2E-38 311 28 52 0 (0) S
Zm00001eb194870_P002 agpv5 Zea mays 4E-38 311 28 52 0 (0) S
GRMZM2G020996_P01 3.21 Zea mays 4E-38 311 28 52 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_4(2) IBR(2) RVT_3(1) zf-C3HC4(2) zf-C3HC4_2(3) zf-RING_2(2) zf-RING_5(3) zf-R
TargetP:	Cytoplasm (Class 2 C0.055; M0.096; S0.115; _0.915)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	312 aa (-cTP 246)
Molecular Weight	35.36 kDA(-cTP )
PI	4.93(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data