PPDB

PPDB	The Plant Proteome Database

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AT3G45555.1 RING/U-box protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G45580.1 11 Arabidopsis thaliana 4E-85 201 64 79 0 (0) _
AT3G43750.1 11 Arabidopsis thaliana 8E-84 208 62 74 0 (0) S
AT3G45540.2 11 Arabidopsis thaliana 4E-77 207 55 71 0 (0) _
Os09g25220.1 7 Oryza sativa 1E-24 187 31 49 0 (0) _
Os08g35060.1 7 Oryza sativa 4E-24 184 30 47 0 (0) _
Os09g26470.1 7 Oryza sativa 2E-22 192 28 45 0 (0) _
Zm00001eb194870_P001 agpv5 Zea mays 3E-40 197 37 58 0 (0) S
Zm00001eb194870_P002 agpv5 Zea mays 2E-39 195 37 58 0 (0) S
GRMZM2G020996_P01 3.21 Zea mays 2E-39 195 37 58 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBR(4) zf-C3HC4(3) zf-C3HC4_2(4) zf-RING_11(2) zf-RING_2(4) zf-RING_5(2)
TargetP:	Cytoplasm (Class 2 C0.044; M0.095; S0.151; _0.879)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	213 aa (-cTP 185)
Molecular Weight	24.96 kDA(-cTP )
PI	6.89(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data