PPDB

PPDB	The Plant Proteome Database

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AT3G45540.1 RING/U-box protein with C6HC-type zinc finger

Lab Annot.

RING/U-box protein with C6HC-type zinc finger
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G45540.2 11 Arabidopsis thaliana 0 319 100 100 0 (0) _
AT3G45580.1 11 Arabidopsis thaliana 1E-109 326 51 63 0 (0) _
AT2G26130.1 11 Arabidopsis thaliana 5E-109 318 54 66 0 (0) _
Os08g35060.1 7 Oryza sativa 4E-32 206 32 51 0 (0) _
Os09g25220.1 7 Oryza sativa 1E-29 219 29 51 0 (0) _
Os09g11170.1 7 Oryza sativa 4E-27 221 29 47 0 (0) _
Zm00001eb194870_P002 agpv5 Zea mays 1E-56 278 36 55 0 (0) S
GRMZM2G020996_P01 3.21 Zea mays 1E-56 278 36 55 0 (0) S
v1_GRMZM2G020996_P01 4a53 Zea mays 1E-56 278 36 55 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBR(4) zf-C3HC4(3) zf-C3HC4_2(4) zf-RING_2(3) zf-RING_UBOX(1)
TargetP:	Cytoplasm (Class 2 C0.115; M0.089; S0.068; _0.888)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	348 aa (-cTP 321)
Molecular Weight	39.73 kDA(-cTP )
PI	9.31(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data