PPDB

PPDB	The Plant Proteome Database

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AT3G45510.1 RING/U-box protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G45480.1 11 Arabidopsis thaliana 3E-109 216 73 81 0 (0) _
AT3G45460.1 11 Arabidopsis thaliana 4E-85 212 63 72 0 (0) _
AT3G43750.1 11 Arabidopsis thaliana 7E-75 222 54 67 0 (0) S
Os09g11170.1 7 Oryza sativa 5E-15 151 30 43 0 (0) _
Os12g43560.1 7 Oryza sativa 2E-13 202 28 42 0 (0) _
Os08g35070.1 7 Oryza sativa 1E-12 165 27 38 0 (0) M
Zm00001eb194870_P001 agpv5 Zea mays 8E-35 213 31 53 0 (0) S
Zm00001eb194870_P002 agpv5 Zea mays 2E-34 213 31 53 0 (0) S
GRMZM2G020996_P01 3.21 Zea mays 2E-34 213 31 53 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_4(2) DUF3343(2) IBR(3) zf-C3HC4(2) zf-RING_11(2) zf-RING_2(1) zf-RING_5(3)
TargetP:	Cytoplasm (Class 2 C0.099; M0.148; S0.051; _0.751)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	257 aa (-cTP 198)
Molecular Weight	29.73 kDA(-cTP )
PI	8.89(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data