PPDB

The Plant Proteome Database

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AT3G45480.1   RING/U-box protein with C6HC-type zinc finger

Lab Annot. RING/U-box protein with C6HC-type zinc finger
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G45460.1 11Arabidopsis thaliana3E-15538160720 (0)_
AT3G45580.1 11Arabidopsis thaliana4E-11936851650 (0)_
AT3G45510.1 11Arabidopsis thaliana4E-10921673810 (0)_
Os11g01240.1 7Oryza sativa5E-2828827450 (0)S
Os12g43560.1 7Oryza sativa8E-2435425450 (0)_
Os08g35060.1 7Oryza sativa7E-2318229460 (0)_
Zm00001eb194870_P002 agpv5Zea mays1E-5934332520 (0)S
GRMZM2G020996_P01 3.21Zea mays1E-5934332520 (0)S
v1_GRMZM2G020996_P01 4a53Zea mays1E-5934332520 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: IBR(4) RVT_3(1) zf-RING_2(3)
TargetP: Cytoplasm (Class 3 C0.190; M0.195; S0.031; _0.786)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 382 aa (-cTP 370)
Molecular Weight 43.68 kDA(-cTP )
PI 8.56(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help