PPDB

The Plant Proteome Database

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AT3G45470.1   IBR domain containing protein

Lab Annot. IBR domain containing protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G25360.1 11Arabidopsis thaliana3E-10522267790 (0)_
AT2G25370.2 11Arabidopsis thaliana8E-9820169823 (3)M
AT2G25370.1 11Arabidopsis thaliana4E-9720169820 (0)M
Os08g35060.1 7Oryza sativa1E-3420733490 (0)_
Os09g25190.1 7Oryza sativa4E-3319735490 (0)_
Os09g25220.1 7Oryza sativa6E-3320530510 (0)_
Zm00001eb194870_P002 agpv5Zea mays4E-6022143600 (0)S
GRMZM2G020996_P01 3.21Zea mays4E-6022143600 (0)S
v1_GRMZM2G020996_P01 4a53Zea mays4E-6022143600 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: IBR(2) zf-C3HC4(3) zf-C3HC4_2(4) zf-RING_2(5)
TargetP: Cytoplasm (Class 2 C0.047; M0.136; S0.088; _0.912)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 222 aa (-cTP 213)
Molecular Weight 25.64 kDA(-cTP )
PI 8.60(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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