PPDB

PPDB	The Plant Proteome Database

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AT3G45300.1 isovaleryl-CoA-dehydrogenase

Lab Annot.

isovaleryl-CoA-dehydrogenase precursor (IVD)
Mapman: 13.2.4.4 amino acid metabolism.degradation.branched-chain group.leucine

Curated Location

TAIR curated location: mitochondrion & mitochondrial matrix14671022,11402190,14764908,11743115

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G51840.1 11 Arabidopsis thaliana 5E-42 322 30 50 176 (133) _
AT3G06810.1 11 Arabidopsis thaliana 1E-17 419 24 39 114 (47) _
AT5G65110.2 11 Arabidopsis thaliana 1E-07 362 22 41 26 (21) _
Os05g03480.2 7 Oryza sativa 0 391 86 93 1 (1) M
Os05g03480.5 7 Oryza sativa 0 320 88 95 0 (0) _
Os05g03480.4 7 Oryza sativa 6E-179 266 88 95 0 (0) M
GRMZM2G052630_P01 3.21 Zea mays 0 384 85 94 4 (4) _
v1_GRMZM2G052630_P01 4a53 Zea mays 0 384 85 94 2 (2) _
Zm00001eb355050_P005 agpv5 Zea mays 0 384 85 94 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Acyl-CoA_dh_1(1) Acyl-CoA_dh_2(1) Acyl-CoA_dh_M(1) Acyl-CoA_dh_N(1) HpaB_N(1)
TargetP:	Mitochondria (Class 3 C0.251; M0.831; S0.014; _0.020)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	409 aa (-cTP 398)
Molecular Weight	44.77 kDA(-cTP )
PI	7.47(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
94	Detail								root [B. rapa]	plastid stroma
119	Detail								root [B. rapa]	plastid stroma
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1018	Detail								[aphid]
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1208	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1541	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	M-48
1650	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	m48
1651	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	wild-type
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2004	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2007	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2028	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
14764908(mitochondria-suspension cells)
17137349(ATP-binding-mitochondria cell suspension)
18385124(mitochondria - leaf and suspension cell)
18385124(mitochondria)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data