PPDB

The Plant Proteome Database

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AT3G45050.1   transmembrane protein

Lab Annot. Zn-finger J-domain protein
Mapman: 26.29* misc.DnaJ domain with unknown function
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G45050.3 11Arabidopsis thaliana5E-9013010010013 (11)C
AT3G45050.2 11Arabidopsis thaliana5E-9013010010013 (11)C
AT3G45050.4 11Arabidopsis thaliana5E-9013010010013 (11)C
Os06g51470.1 7Oryza sativa1E-094564770 (0)S
v1_GRMZM2G074252_P01 4a53Zea mays4E-156155681 (1)C
GRMZM2G074252_P01 3.21Zea mays4E-156155680 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Anti-TRAP(1) DnaJ_CXXCXGXG(1) DUF2884(1) MHYT(1) PALP(1)
TargetP: Chloroplast (Class 2 C0.800; M0.018; S0.065; _0.090)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 130 aa (-cTP 50)
Molecular Weight 13.75 kDA(-cTP 5.22)
PI 9.18(-cTP 8.47)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1331Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1332Detail       leaf [A. thaliana] chloroplast thylakoid membraneshoot1
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1596Detail        [A. thaliana]  
1643Detail       leaf [A. thaliana] total leaf tissue Wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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