PPDB

The Plant Proteome Database

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AT3G44720.1   arogenate dehydratase 4

Lab Annot. arogenate dehydratase/ prephenate dehydratase (ADT4)
Mapman: 13.1.6.3.1 amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase
Curated Location plastid stroma (Pubmed: 23198870 19136569 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G22630.1 11Arabidopsis thaliana0422818733 (9)C
AT1G08250.1 11Arabidopsis thaliana0377738416 (5)C
AT2G27820.1 11Arabidopsis thaliana0366738487 (21)C
Os04g33390.1 7Oryza sativa039171810 (0)C
Os09g39230.1 7Oryza sativa038570812 (2)C
Os09g39260.1 7Oryza sativa1E-17839268812 (2)C
v1_GRMZM2G437912_P01 4a53Zea mays038872820 (0)C
Zm00001eb084260_P001 agpv5Zea mays038872820 (0)C
GRMZM2G437912_P01 3.21Zea mays038872821 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ACT(1) PDT(2)
TargetP: Chloroplast (Class 2 C0.881; M0.029; S0.002; _0.243)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 424 aa (-cTP 390)
Molecular Weight 45.92 kDA(-cTP 42.17)
PI 6.05(-cTP 5.65)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
2289Detail        [A. thaliana] Clp C1 TRAP
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)

Comparative Proteomics Data


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