PPDB

The Plant Proteome Database

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AT3G44680.1   histone deacetylase 9

Lab Annot. histone deacetylase 9
Mapman: 27.3.55 RNA.regulation of transcription.HDA
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38130.2 11Arabidopsis thaliana8E-17539759773 (2)_
AT4G38130.1 11Arabidopsis thaliana1E-17439759775 (2)_
AT5G63110.1 11Arabidopsis thaliana5E-16942354720 (0)_
Os04g33480.1 7Oryza sativa042471820 (0)_
Os06g38470.3 7Oryza sativa2E-17741257770 (0)_
Os06g38470.1 7Oryza sativa2E-17741257772 (2)_
Zm00001eb084120_P001 agpv5Zea mays041882940 (0)_
GRMZM2G119703_P01 3.21Zea mays040882940 (0)_
GRMZM2G119703_P02 3.21Zea mays040682950 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Hist_deacetyl(1)
TargetP: Cytoplasm (Class 2 C0.080; M0.145; S0.109; _0.865)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 426 aa (-cTP 418)
Molecular Weight 48.69 kDA(-cTP )
PI 5.21(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help