PPDB

The Plant Proteome Database

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AT3G44600.1   cyclophilin71

Lab Annot. CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G36130.1 11Arabidopsis thaliana7E-51154516821 (17)_
AT1G01940.1 11Arabidopsis thaliana3E-4915250692 (1)_
AT5G13120.2 11Arabidopsis thaliana2E-411435570332 (260)C
Os08g44330.1 7Oryza sativa060181930 (0)_
Os08g44330.2 7Oryza sativa051381930 (0)_
Os08g44520.3 7Oryza sativa6E-5016152670 (0)_
v1_GRMZM2G049525_P01 4a53Zea mays0609809215 (15)_
GRMZM2G049525_P03 3.21Zea mays060980921 (1)_
GRMZM2G049525_P01 3.21Zea mays060980921 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nup160(1) Pro_isomerase(1) WD40(4)
TargetP: Cytoplasm (Class 3 C0.283; M0.068; S0.036; _0.879)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 631 aa (-cTP 606)
Molecular Weight 70.98 kDA(-cTP )
PI 6.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help