PPDB

The Plant Proteome Database

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AT3G44590.1   60S acidic ribosomal protein family

Lab Annot. 60S acidic ribosomal protein P2 (RPP2D)
Mapman: 29.2.1.2.2.82 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2
Curated Location not plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G44590.2 11Arabidopsis thaliana7E-7011110010030 (18)S
AT2G27710.4 11Arabidopsis thaliana7E-2770708564 (61)S
AT2G27720.1 11Arabidopsis thaliana1E-241157180291 (218)S
Os05g37330.1 7Oryza sativa3E-25113637932 (32)S
Os01g09510.4 7Oryza sativa7E-23114577215 (15)S
Os01g09510.1 7Oryza sativa7E-23114577232 (32)S
GRMZM2G075630_P01 3.21Zea mays2E-26111617495 (94)S
v1_GRMZM2G075630_P01 4a53Zea mays2E-26111617480 (80)S
Zm00001eb433350_P001 agpv5Zea mays2E-2611161740 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ribosomal_60s(1)
TargetP: Secreted (Class 4 C0.107; M0.093; S0.549; _0.217)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 111 aa (-cTP 92)
Molecular Weight 11.02 kDA(-cTP )
PI 4.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1574Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19888209(80S polysomal fraction)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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