PPDB

 The Plant Proteome Database

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AT3G44380.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G01080.1 11Arabidopsis thaliana3E-0714828450 (0)_
AT1G52330.2 11Arabidopsis thaliana2E-0613622440 (0)C
AT1G52330.1 11Arabidopsis thaliana2E-0613923430 (0)C
Os08g44410.1 7Oryza sativa2E-6118153670 (0)M
Os05g40400.1 7Oryza sativa4E-1312733490 (0)M
Os12g02700.1 7Oryza sativa3E-1014332460 (0)C
v1_GRMZM2G320708_P01 4a53Zea mays7E-5817853681 (1)M
GRMZM2G320708_P01 3.21Zea mays7E-5817853682 (2)M
Zm00001eb011530_P001 agpv5Zea mays3E-0815428460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: LEA_2(1) tify(1) zf-SCNM1(1)
TargetP: Cytoplasm (Class 5 C0.024; M0.125; S0.225; _0.248)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 186 aa (-cTP 161)
Molecular Weight 20.41 kDA(-cTP )
PI 6.58(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help